BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012G12SP1|AL426425
(750 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig809 1468 0.0
>3x_Contig809
Length = 3151
Score = 1468 bits (739), Expect = 0.0
Identities = 748/751 (99%), Gaps = 1/751 (0%)
Strand = Plus / Plus
Query: 1 gatacgacgattctrtaccatgtcacctcaaatgaaaacaaacaattgcagaaccataga 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gatacgacgattctgtaccatgtcacctcaaatgaaaacaaacaattgcagaaccataga 429
Query: 61 catcccgagtatctttacagaaataacttcccagagacctttgttgttactggagacatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 catcccgagtatctttacagaaataacttcccagagacctttgttgttactggagacatt 489
Query: 121 catgctgaatggttgagagattctgcttggcaattgtcggtgtatcagccgttgataaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 catgctgaatggttgagagattctgcttggcaattgtcggtgtatcagccgttgataaag 549
Query: 181 tacgaccaaggtttaagggaattgataaagggtgccatcaacacacagtcccaattgata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tacgaccaaggtttaagggaattgataaagggtgccatcaacacacagtcccaattgata 609
Query: 241 ctttccaacgcttattgcaatgcgttccacccacctctttataccaagatcaagaaggga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ctttccaacgcttattgcaatgcgttccacccacctctttataccaagatcaagaaggga 669
Query: 301 gaaggccactttgacaacgttttccctaggcccaattggagacaggtctttgagtgcaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 gaaggccactttgacaacgttttccctaggcccaattggagacaggtctttgagtgcaaa 729
Query: 361 tatgagattgactctctcgcgtctttcttgaccttgtctcgtcaatatttcgaaaatagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 tatgagattgactctctcgcgtctttcttgaccttgtctcgtcaatatttcgaaaatagc 789
Query: 421 ccccaggaaagcagactagatttcattacggatgactggctcgttgcactaacccaagtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 ccccaggaaagcagactagatttcattacggatgactggctcgttgcactaacccaagtc 849
Query: 481 ttgaccgtcttggggcgggaatcagtgtccacgttcgatgaaagtggtcatgttaacaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 ttgaccgtcttggggcgggaatcagtgtccacgttcgatgaaagtggtcatgttaacaaa 909
Query: 541 ttctactatgtctttaagagaaataccgatgtggcttctgaaacgttaccccttgcagga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 ttctactatgtctttaagagaaataccgatgtggcttctgaaacgttaccccttgcagga 969
Query: 601 actgggaatcctgtgaatttaaacactggacttatcagatctgctttcagaccaagcgat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970 actgggaatcctgtgaatttaaacactggacttatcagatctgctttcagaccaagcgat 1029
Query: 661 gactccactattttccagttctttattccaggtaacgcccatatggctacggaacttgaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1030 gactccactattttccagttctttattccaggtaacgcccatatggctacggaacttgaa 1089
Query: 721 cggatagt-cccatattacaggrttttgaga 750
|||||||| ||||||||||||| ||||||||
Sbjct: 1090 cggatagtccccatattacaggattttgaga 1120
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4391
Number of Sequences: 1807
Number of extensions: 4391
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 750
length of database: 10,358,551
effective HSP length: 16
effective length of query: 734
effective length of database: 10,329,639
effective search space: 7581955026
effective search space used: 7581955026
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)